Browse of TCMCG051C37331 protein

CDS

Accession Number	TCMCG051C37331
gbkey	CDS
Protein Id	XP_024439454.1
Location	join(5360896..5361359,5361467..5361584,5363669..5363949,5364125..5364223,5364328..5366056)
Gene	LOC7482390
GeneID	7482390
Organism	Populus trichocarpa

Protein

Length	896aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_024583686.1
Definition	zinc finger protein VAR3, chloroplastic [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Zinc finger protein VAR3
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009451        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009532        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009570        [VIEW IN EMBL-EBI] GO:0009657        [VIEW IN EMBL-EBI] GO:0009658        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0016556        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044434        [VIEW IN EMBL-EBI] GO:0044435        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1900865        [VIEW IN EMBL-EBI] GO:1900871        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCAGCAACGCCACCAGGTTCCTCATGCTCCTCACCACCACAACCACCATTCCTTCCCCACTCCGTTACCCATCGATCCTCCGCCTCACCCGCCACCACATTCCTTCATCTCTCTCCTCCCTTTCCCACCACCACCACAACCTCTTCACTCTCTCCCTTCCTCGCCCTTTAAAATCCAATTGCTCCCCTTCCCAGCACCACCAACAACTCCATACCACTGCCCATTTCTCCGATTCCCCTTCCACCTCAACTTCCTTTCCTTCTACCTCCGGGTTCTCCGACCCCTGGCCAGAGTGGTCTAAATTTGTTAACAACCTCTCTGCGGCCGGTTATTTTAATATCAAGCATGGTTCTAATACTCCAAGTGATGATCTCACCTCAGTTGATGATTTATCAGAGGGGTTTTTGCGTTCTTGCACTGCTTCCTTAGCTTTCGCGCGTGATAAACCTCAGGCTTTAGGGATGCTTTCGAGAAGAGATATTGAGGTCGTGGTTCAAAGTGGGTTACCATTTTTGTTCAAGAATAGTGACGATTCAGTGAGGAGGATGAAGTTGTTTTTGCATGGAAGTGATAGTAATGTGCCAAATACTGATAAAGCACGGACAGTGGACCTGATGAAGTTTCTATTGAGTTATGCCAGCAGTTTTGTTTCTTCTGTGAAGACCAATCTTCATAATTTAGAACTTGTGGAGCCATCTGTTCGAAGTCTCTTTAGTGAGTTGGCTCAGCTGGGCTACAATGCTGTGGAGGAAAACCTAAATGGTTCATTTGGAAATCAGTTCCCTGATAGATATGGACAAACACCAAGGCCTCGTGGGCAAAATATTGAAATGAAAAGAGGTGACTGGATATGCCCAGGGTGTAGTTTCATGAACTTTGCAAGAAACATGAAATGCCTTGAATGTGATGAACAACGGCCCAAGAGACAACTTACTGGTGGAGAGTGGGAGTGTCCTCAATGTGATTTCTATAATTATGCAAGGAACATGGTATGCTTAAGGTGTGATTGCAAGCGACCAGGAGGTGTTTCACCCATTAGCACCAGCTCTGGATCAGACATAGGATATGGCAGTGGGAGCTATGTGAATAAAAGTGATCTGGTTAGCAGGCTGGCTGCCAATGAAAAGATGGCACAGCAGAGGCATGGCAATGTTTCTCAGATGGACAGTTCTTTGGACAGGAATGGTGCCAAAGCAGATGAAGATTTTCCTGAAATAATGCCATTGAGGAAAGGGGTGAACAGATTTGTTGTCAGCACAAGGAAGACTCCACTGGAAAGGAGGTTGGCAAATTCTCAATTCCAAGAAAACATGGGTACTGATGACACTCGGGAAAGGAATGATAATCAAAGCATAGGTACAACCAATCCCCTCAACCAAACTATCAATCGGAGCCCTGCTTCACCACTATTTAGTGCCCCTAGAGGAAGCAATTCCAATTATGTTCCGTTTGTGCCGTTACCTGCTGACATGTTTGCCAAGAAACCTGAGAACTCAAAGATGGAGGAGAGGGAGAAGTTGGAGACAGTCAACTATGAATCTCTTACTTCAAGCAACGGTGAGCAGAAAGGTGTTATTTCTGAGCGCAGTGAGCATGGTAAATCAAGAGATAGCTGCCAACCCTCTGAGATGTCCATGGACCAGAATCTGAGTGATGATAATGAGAAAGACGTAGCTGAAAAATCAGAGAGATGGTTTAAGAGGGTAGCAGAGTTGCATAATGTCACTGATCTGACCAGTGCAATTTCAGATGATGACTTCCCTGAGATCATGCCGTTGCGTAAAGGAGAGAATAAATTTGTTGTTAGCAAGAAGAAAGATAGGTCTCTGACTTCTCCAATGTACAAGAGACATGCAGCCATGGAGCAAGCTAACACCACAAATTCCGTACCCTTTGTCCCCTTCCCACCCAACTACTTTGCTAAAAAGGATAATCAGCAACCAGATGAGACAGATTCCCATGATAAAGGTGTTAGCGAAACCTCAAGTTCTGCAACTCTGGAGAAGCATCCACAGAAGTTGGATGATGCTAGACTTGGGGTTACCCATGCAGCTCAGGAGGACAGTACAGGGAGCTGGTCTGGGGAGAAGAAGAGTGATTTAAAGAAAGGTGCCACTTATGGGAAATCGGCAGGTGGAAATTTTACCCAAAATTTTATTGATCCCCTGCCAGCTGGCAGGGATAGTTGGAACACTGGAAATTCTAGGAGTGCGAATGCCACTGGGACATCAAATCAAATGGGGAACTCAATGCAAAACTTAAATAATTCCCCCGCAAATACCAATGACAGCGAGAGTAATGGATCTTCCTGGAAAGAGAATATCAGTGAGAAGAAGATTTTCACGGGAACTGCACCTCAATCATCTAAGAATCAGAGTGTTGGGGATAGCTGGACTGGAAAGAGCTTGGAAGGGTCGGCAGTGAAGGAACCAGATCCTTTGGACATGTCTGAAGAGGCCAAGTCAGAAAGGTGGTTCCGACGGGTTGCGCAGATCAAGGACATCTCAGAGCTCAGTCAGATCCCAGATGAGGATTTCCCATCAATAATGCCAATGCGGAAAGGGGTGAATAGATTTGTTGTGAGCAAACGAAAAACACCGTTAGAGAGAAGGTTGACATCTACTCAGTATAGAAAAAATCTTCCAATTGTCAGCTCTGATCCTGTGAAGGAAAATGACAGTAGCTGA

Protein:   MSSNATRFLMLLTTTTTIPSPLRYPSILRLTRHHIPSSLSSLSHHHHNLFTLSLPRPLKSNCSPSQHHQQLHTTAHFSDSPSTSTSFPSTSGFSDPWPEWSKFVNNLSAAGYFNIKHGSNTPSDDLTSVDDLSEGFLRSCTASLAFARDKPQALGMLSRRDIEVVVQSGLPFLFKNSDDSVRRMKLFLHGSDSNVPNTDKARTVDLMKFLLSYASSFVSSVKTNLHNLELVEPSVRSLFSELAQLGYNAVEENLNGSFGNQFPDRYGQTPRPRGQNIEMKRGDWICPGCSFMNFARNMKCLECDEQRPKRQLTGGEWECPQCDFYNYARNMVCLRCDCKRPGGVSPISTSSGSDIGYGSGSYVNKSDLVSRLAANEKMAQQRHGNVSQMDSSLDRNGAKADEDFPEIMPLRKGVNRFVVSTRKTPLERRLANSQFQENMGTDDTRERNDNQSIGTTNPLNQTINRSPASPLFSAPRGSNSNYVPFVPLPADMFAKKPENSKMEEREKLETVNYESLTSSNGEQKGVISERSEHGKSRDSCQPSEMSMDQNLSDDNEKDVAEKSERWFKRVAELHNVTDLTSAISDDDFPEIMPLRKGENKFVVSKKKDRSLTSPMYKRHAAMEQANTTNSVPFVPFPPNYFAKKDNQQPDETDSHDKGVSETSSSATLEKHPQKLDDARLGVTHAAQEDSTGSWSGEKKSDLKKGATYGKSAGGNFTQNFIDPLPAGRDSWNTGNSRSANATGTSNQMGNSMQNLNNSPANTNDSESNGSSWKENISEKKIFTGTAPQSSKNQSVGDSWTGKSLEGSAVKEPDPLDMSEEAKSERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSTQYRKNLPIVSSDPVKENDSS